Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKRTPISFEFFPPKTDASAEKLRIVHQELQHLNPEF--FSITYGAGGSTRERTLAAIEDFNG-KGTPVAPHLSCIGDDKTRIAELLDLYKAQGIDRIVALRGDLPSGQVGLGELPYAQDLVRFIREHSGDHFHIEVAAYPEMHPQAESLDSDIQRFIEKVQAGANAGITQFFFNPDSYFYFIERLEKAGINIPVAPGIMPITNASNLIRFADGTGAEIPRWIRKQLQAYGDDSESIKAFGHEVVVKLCERLIAGGAPSLHFYSMNQVEPTRQLVVDLGLN
1B5T Chain:A ((1-272))--GQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERD--RTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLPPGS--GKPEMYASDLVTLLKE-VA-DFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGV-


General information:
TITO was launched using:
RESULT:

Template: 1B5T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1314 -38674 -29.43 -143.77
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -29.43
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.648

(partial model without unconserved sides chains):
PDB file : Tito_1B5T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B5T-query.scw
PDB file : Tito_Scwrl_1B5T.pdb: