Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIFETVVTDVGIEAEVFRKEKIMILFGDEAPETLTDYCYKIELNQVRKEITCDMKLCFDKQMYVITAVGDVVQTNLNELGHITIKFDGSHEPELPGTMYVEDKEMPHLRKGTIIKIDQEDQNGGKLYGNHA
1M5I Chain:A ((130-239))---------STG-YLEELEKERSLLLADLDKEEKEKDWYYA-QLQNLTKRIDSLPSLQTDMTRRQLEYEARQIRVAMEEQL---------------GTC-QDMEKRAQRRIARIQQIEKDILRIRQLLQSQA


General information:
TITO was launched using:
RESULT:

Template: 1M5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 175 -8064 -46.08 -76.80
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -46.08
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.143

(partial model without unconserved sides chains):
PDB file : Tito_1M5I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1M5I-query.scw
PDB file : Tito_Scwrl_1M5I.pdb: