Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLDLLKQTIFTRDFIFILILLGFILVVTLLLLENRRDNIQLKQINQKVKDLIAGDYSKVLDMQGGSEITNITNNLNDLSEVIRLTQENLEQESKRLNSILFYMTDGVLATNRRGQIIMINDTAKKQLGLVKEDVLNRSILELLKIEENYELRDLITQSPELLLDSQDINGEYLNLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALCETVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDKMKGQEKEKKYELVRDYPINSIWMEIDTDKMTQVVDNILNNAIKYSPDGGKITVRMKTTEDQMILSISDHGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLGLSIAKEIIKQHKGFIWAKSEYGKGSTFTIVLPYDKDAVKEEVWEDEVED
4BIX Chain:B ((82-296))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLLSDISHELRTPLTRLQLGTALLRRRSGE----SKELERIETEAQRLDSMINDLLVMSRNQQKN-ALVSETIKANQLWSEVLDNA---AFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHT--KIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD--------GTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK--------------


General information:
TITO was launched using:
RESULT:

Template: 4BIX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 852 -95029 -111.54 -459.07
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : -111.54
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_4BIX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BIX-query.scw
PDB file : Tito_Scwrl_4BIX.pdb: