Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREKMRFPTLVFDIETLTDLKAGAHLYHLDLPEADVEQALTKIRRQESGMDFQRLPLHEIVCISGLWIDESGFRLFS-----FSREHYSEAEILQKFLSIFDKRHP-TLVSWNGSQFDLPVILFRAMYHGLSAPGLFDQGELDSQK-RFNN-YQNRY-HHRHIDLMDVMAMF-NGRNFQKLDDVACILGLPGKRGESGYHVPEYVRTE-QWLKLTSYCEGDVLNTWFIYLRWLLLKGQMNVDEHNHWISSSIEYLQTMPQQADFLEVWQRTSKHTEFTSHYFNPLNF
1TGO Chain:A ((133-328))----EELKMLAFDIETLYHEG-------------------------------EEFAEGPILMISYADEEGARVITWKNIDLPYVDVVSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYLKKRSEKLGVKFILGRE--GSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPT-YTLEAVYEAIFGQPKEKVYAEEIAQAWETGEGLERVARYSMEDAKVTYELGKEFFP-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1TGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 861 -4652 -5.40 -25.15
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -5.40
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.316

(partial model without unconserved sides chains):
PDB file : Tito_1TGO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TGO-query.scw
PDB file : Tito_Scwrl_1TGO.pdb: