Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIYDGQVADNYMYQDSNQAAIVVSHSTPSLPYPFTMKPNNHSTETNTPPAIDVEKFVAKLESITSRRSKARCARSIRIALESAGADVENHPIAASDWGDTLKKIGYKEINPAFDEPQEGDIYIIHRTRNHIYGHIAGYTGSEWVSDFKQSSYDVYKDDNVTYTYYRLG
2L8K Chain:A ((1-123))-----GLTATLAALTDDDFQFLSDVLDCRAVRSAMNLR--------AALTSFQVAQYRNILNASLQVDRDAARSRRLMAKLADFAVEQEVTA------GDRVVVIDGLDRMAHFKDD-----LVLVPLTTKVVG------------GSRCTICDVVKEE----------


General information:
TITO was launched using:
RESULT:

Template: 2L8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 512 -40486 -79.07 -329.15
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -79.07
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.285

(partial model without unconserved sides chains):
PDB file : Tito_2L8K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2L8K-query.scw
PDB file : Tito_Scwrl_2L8K.pdb: