Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALIRKRRLTEQQQRRIEKQHKTRQEEVDTSQDLDGLVVQHYGRQLEVQALSVPAHHPEKPQVAEGEPEPFWKPIELNSVWRCHTRTN-L---ELLVTGDRVKWQADPNTGLGIITAIHPRTSLLTRPDRYHKVKPVAANISLIVIVFA-PLPEPAPTLIDRYLVACADANIPALLVLNKSDLLTEN--NPILDMLKEYENLGYEVMICHS-KGD-ISALSQRLDGETVAFVGQSGVGKSSLINVLIPDAEQKTNIISENSALGQHTTTSTRLINFGRNGALIDSPGIREFGLWHLDLDKIRMGFPEIEAHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDEIQEAQQKN
1U0L Chain:B ((9-299))-------------------------------LRRRGIVVSFHSNMVTVEDEET------------------------GERILCKLRGKFRLQNLKIYVGDRVEYTPDE-TGSGVIENVLHRKNLLTKPH--------VANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVINKMDLYDEDDLRKVRELEEIYS-GLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLNAINPGLKLR-------------TTTTAQLLKFDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGD--KQCFFSDCNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGRR---


General information:
TITO was launched using:
RESULT:

Template: 1U0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1372 24708 18.01 91.85
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : 18.01
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_1U0L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U0L-query.scw
PDB file : Tito_Scwrl_1U0L.pdb: