Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDTDPLVSCENLTSIVNLEHLMTTPVSFHPQAFIELALSRGVLKFGEFTLKSGRVSPYFFNAGLLNDGEALSLLAQGYADKLTQ-CENVDVIFGPAYKGIPFVAATAVALSQTHNKSVPWGFNRKEAKDHGEGGVLVGAAVEGKKVWIIDDVITAGTAIREVVTILKNAGATIAGVLVALDRQERGQGELS-AIQEVQKELEIPVHALITMKDLMDYLEAKGE-KEALANMQAYREKYGI
1LH0 Chain:B ((3-213))---------------------------PYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKE-------GSLVGSA-LQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVE-RDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV


General information:
TITO was launched using:
RESULT:

Template: 1LH0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1034 -58289 -56.37 -290.00
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -56.37
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.644

(partial model without unconserved sides chains):
PDB file : Tito_1LH0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LH0-query.scw
PDB file : Tito_Scwrl_1LH0.pdb: