Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTATALTLACSLLSVMSISQAQAADNIDVSFQTILQQERNWAGLQSKSLKVGDITWSYSEGGSSTKPTLLLIHGLAGSRDNWNRVAHYLTTNYHVIIPDLPGSGETIVSHDFDYSVPNLAEKLRRFVEAANLKGPIHIAGHSLGGSIALLYAGQYPFETKSLFLVDSGGIFRSANTIYLKDLTYLKQLLVSK-KGDFNYLLKQTMFNPP-FIPREFLQAQEKLMINQAPQTQKLVDQLIALNKVYTPDSFAVLTKTIDAPTLILWGKQDKIINVEVANELKRLLKNAQPPVILENVGHMPILEAEQLVIQQYVPFLLKVETNQSSKTTTP
3OM8 Chain:B ((12-266))----------------------------------------------------SDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVPP-GPYTLARLGEDVLELLDALE-VRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQ-WDERIAA--VLQAEDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMAT--NRHGLAGSFAAVR-DT---DLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAG-ARLVTLP-AVHLSNVEFPQAFEGAVLSFLGA------------


General information:
TITO was launched using:
RESULT:

Template: 3OM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1465 -96023 -65.54 -379.54
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -65.54
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_3OM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OM8-query.scw
PDB file : Tito_Scwrl_3OM8.pdb: