Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEVKKLTREEVFNKVAKIISNHFEIDTDKVTDELNIKDDLKADSISIMEFVLELEDEFGTEISDEDAEQIETVGGAVDYISSHLK
4IHF Chain:L ((9-77))-------------RVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING---


General information:
TITO was launched using:
RESULT:

Template: 4IHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 221 -39397 -178.26 -570.96
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain L : 0.84

3D Compatibility (PKB) : -178.26
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_4IHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IHF-query.scw
PDB file : Tito_Scwrl_4IHF.pdb: