Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKFRKIVGTIAILTASILLSACGNSGSADDSTGYVGIAMPTKSAERWIADGNNMVSELEKLGYKTDLQYGEDKVENQVAQIENMITKGVDTLVIASIDGSALTDVLAKAKEADIKVIAYDRLLMNSENVDYYATFDNFGVGVSQAAYIEEHLGLKEGKGPFTIELFG-GSPDDNNALINYNGVMSVLQPYMDNG-----------------------QLVVPSGQTSFSQIATLRWDGSTAQARMDNLLSANY-TDQTLDAVLSPYDPISLGIISSLKGVGYGSESKPLPVITGQDATVAGVKSIIAGEQTQTIFKDTRILAKNTIEMIKAISDGEEVPVNDTETYDNGVKTVPTYLANTVSVDKDNYQAELIDTDYYKESDLKN
4RXU Chain:A ((28-363))-------------------------------TQQLAVGIVLPTKDEPRWIQDETRFREALQQAGYQVEILFSQGSSAKEKENVEALIAKGIKVLIICPHDGTAAAAAAEAARAAGVKVISYDRLIRETDAVDYYVTFDSIAVGAQQAQYLVDHASG-----TGNPLYLYAGAASDNNAFLFFEGAWKVLQPKIADGTFVIKNSSEAVALQNKLDLTRDEMAKIIGQ-------VTTNWDFNTAKNLAEANLTAATAADKGKVYILAPNDGTARAIADAFAADKDV---TE-YFVTGQDAEKASVQYIIDGRQSMTVFKDVRTLVQDAIKAAVALLQDQQPEAR--GTYNNGKKDVPAIQSPVVTVTRDNVRAALIDSGYYSASDF--


General information:
TITO was launched using:
RESULT:

Template: 4RXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1876 -49500 -26.39 -159.16
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -26.39
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_4RXU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RXU-query.scw
PDB file : Tito_Scwrl_4RXU.pdb: