Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------MISKEKRTSILYSFIALLFSIALYFNANGQSVPNTLSGNEAYNQTVTGVPIKISYDSKRYYIHGYENAVTVKLSSANRVQLNAEANEDTRMFRVTADITKLGEGTH---EVPLKIQNLSSAVTAKIEPSTITVTVEK-----KVIKDFDVETLIPSTFTPSGYELDDT-----SVSPKKVSITTGDKTLAEIKRVVADVDASMVTDDGINSEVPIQALNAAGEVLSIVSDPVQVTVRADSIKPSKSVRLYGIQQGTPAAGVESYDFSFSKLEAEVSGSSDLLASIGDSIAVPINVSGINHRTTRKIEIPVEEGLSIKPESVSVEITPVLQTSSSSSASTSSRTQENTSTSRSISSADSGTEPSTTTISSSSESGTSSSTTST-----------EETSETSESTQMSRTNSSEN
4CZB Chain:A ((1-415))MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIP-----------SDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRV-IKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPATLIPVFSRVRTNPEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAMLLLYVG-DDLLPSICGYGFSGYMAVAIMGLYLGDALFRADDIDYKYIVSFCD-DLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLALKLLGE-


General information:
TITO was launched using:
RESULT:

Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1811 -7201 -3.98 -19.25
target 2D structure prediction score : 0.32
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -3.98
2D Compatibility (Sec. Struct. Predict.) : 0.32
1D Compatibility (Hydrophobicity) : 0.64
QMean score : -0.030

(partial model without unconserved sides chains):
PDB file : Tito_4CZB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CZB-query.scw
PDB file : Tito_Scwrl_4CZB.pdb: