Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCPPDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHAGHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDETITLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTETTGFYFQ----DGDRIIEVGAIEMINRKLTGSSIHIYINPEKPV-GDSVQVHGITDEFLVDKPKYAEIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRV--GLPALSEVCEVTDTLALAKNKHPGQKNSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTKARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK 5M1S Chain:D ((7-243)) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTGGQLSLPLA--MEGETIQRIVRQAS---KLRVVFATDEEIAAHEARLDLVQKKGG-SCLWRA

General information: TITO was launched using: RESULT: Template: 5M1S.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 762 14405 18.90 64.89 target 2D structure prediction score : 0.60 Monomeric hydrophicity matching model chain D : 0.71 3D Compatibility (PKB) : 18.90 2D Compatibility (Sec. Struct. Predict.) : 0.60 1D Compatibility (Hydrophobicity) : 0.71 QMean score : 0.441

(partial model without unconserved sides chains): PDB file : Tito_5M1S.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5M1S-query.scw PDB file : Tito_Scwrl_5M1S.pdb: