Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPNTIFLQRVADLYDTFKQHDSQQSDRLQRYRNIEVESAQLISQLIRMQQAKSILEIGTSTGYSTLWLAEAAQATGGQVITVEIDAKRSAEAKRHVAELELSEIVQFWVGDAADYLKA--AQEKFDFILLDAERDAYENYWPDLKRLMKPKGGVLVVDNVISHA------------AEVNRFIALIKKDPDYMSSIL-PVG----AGLCLVVTK
3TFW Chain:A ((45-223))---------------------------------VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPA-DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVN


General information:
TITO was launched using:
RESULT:

Template: 3TFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 748 -43946 -58.75 -274.66
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -58.75
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_3TFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TFW-query.scw
PDB file : Tito_Scwrl_3TFW.pdb: