Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATI---TEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAVE--RGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNR-HIYPGDRFAK-------QAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQKR-TARIIADSILNLFGLGLIGPESPSVSAQNSDTPLLPPAVP
4LY1 Chain:A ((2-317))------------KKKVCYYYDGDIGNYYYG--QGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKY---HQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTF----NLPLLMLGGGGYTIRNVARCWTYETAVALDCE------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1829 -59868 -32.73 -198.24
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -32.73
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4LY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LY1-query.scw
PDB file : Tito_Scwrl_4LY1.pdb: