Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAREQGVVKWFNDTKGFGFIQR-NGGDDVFVHFRAIVGDGHRSLRDGQRVEFSVVQGQKGFQAENVQPLD
1C9O Chain:A ((1-66))---MQRGKVKWFNNEKGYGFIEVE-GGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL-


General information:
TITO was launched using:
RESULT:

Template: 1C9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 279 -5053 -18.11 -77.73
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -18.11
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_1C9O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1C9O-query.scw
PDB file : Tito_Scwrl_1C9O.pdb: