Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPRAGQPHAEVFALRQAGEQ---AQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEIGICEDLAAQLNQGFLKAMSSGMPYVRLKVASSLDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIETVIADDCQLNVRPLHNVDIETVAQPKRVILDRRGRLPLT-AKILE-NPETVMVMGPYRQELADLGVIQL--EIQPLKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQSARAMFNADFEYMAQQLRFKLLDVTQLDQDIRLRLIPTQEKV
2HXV Chain:A ((11-357))---HHMYETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNPV-SGNGVEKFRNHGIEVIEGVLEEEVKKLCEFFITYVTKKRPFVALKYASTLDGKIADHRGDSKWITDK-LRFKVHEMRNIYSAVLVGAGTVLKDNPQLTCRLKEG------RNPVRVILDRKGVLSGKVFRVFEENARVIVFTESEEAE-YPPHVEKALSD-CSVESILRNLYE-RDIDSVLVEGGSKVFSEFLDH--ADVVFGFYSTKIFGKGL-DVFSGYLSDVSVPPKFKVVNVEFSDSEFLVEMRPC----


General information:
TITO was launched using:
RESULT:

Template: 2HXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1900 -15934 -8.39 -46.86
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -8.39
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_2HXV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HXV-query.scw
PDB file : Tito_Scwrl_2HXV.pdb: