Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERIAQPDCVNGCIFDGFPRTIPQAEALEKE----GISIDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETIRKRLASYHTETEQLVGFYQGRAASGENAPTYDKLDGLRTIEDVQKDLFNILDK
3DKV Chain:A ((1-212))MNIVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRPIDYVINIQVDKEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVTKRLEVNMKQTAPLLAFYDSKEV-------LVNVNGQQDIQDVFADVKVIL--


General information:
TITO was launched using:
RESULT:

Template: 3DKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 971 -48644 -50.10 -233.87
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -50.10
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_3DKV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DKV-query.scw
PDB file : Tito_Scwrl_3DKV.pdb: