Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWKMDNQLTKELKENYNIVFHDLNLLEQAFTHSSYVNEHRNLQLSDNERLEFLGDAVLELMVSQYLFRLYPHLPEGKLTKTRAAIVREDSLSKFAKECHFDQYVLLGKGEENSGGRTRPALLCDLFEAFLGALYLDQGFDT--THAFIEKVIFPKVKAG--AFSHEMDHKTKLQEVLQKSGDVSIEYRLINEEGPAHERVFWIEVYVDDQLIGTGQGKSKKLAEQAAAENALAAL
1RC7 Chain:A ((2-217))------KMLEQLEKKLGYTFKDKSLLEKALTHVSYSK------KEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKRGK------INETIIGDVFKALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIKE-YRTLGEGKSKKEAEQRAAEELIKLL


General information:
TITO was launched using:
RESULT:

Template: 1RC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 872 -37544 -43.06 -177.09
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -43.06
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_1RC7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RC7-query.scw
PDB file : Tito_Scwrl_1RC7.pdb: