Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------------------------------MQTLVTKGDLNELFRSHLEKAIN---TLLRTELTAFLDYEKYDRTGFNSGNSRNGSYFRSIKTEYGELTLE----------------IPRDRNGEFKQQTLPAYKRTNDTLETTII-------HLFEKGVTMSEIADLIEKMY---GHHYTPQTMSNMTKVLTE----EVNAFKSRALNDKYVAIFMDA--------TYIPLKRQ---TVSKEAIYIAIGIRED-------------GTKEVLSYAIAPTESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCCIHVSRNIAHKVRVKDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNYPKVTQSLIENQDLLTFYDFPPSIRRT---IYSTNLIESFNKQIKR-----YSRRKEQFQNEESLERFLVSIFDTYNQKFLN---------RSHKGFQQVTDTLVSMFTE-----
3KZW Chain:A ((22-515))SNAMNFKLNNTLSNEINTLIIGIPEHLNQLERISFNHIDITESLERLKHQHIIGSKVGKIYTTAFDVQDQTYRLITVGLGNLKTRSYQDMLKIWGHLFQYIKSEHIEDTYLLMDSFISKYDQLSDVLMACGIQSERATYEFDHYKSSKKAPFKTNLNLISESLIELDFIHEGISIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDEAPIALVGKGITYDSGGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAENMINEASMKPDDVFTALSGETVE----------VMNTDAEGRLVLADAVFYANQYQP--SVIMDFATLTGAAIVALGDDKAAAFESNSKVILNDILQISSEVDEMVFELPITATERASIKHSDIADLVNHTNGQGKALFAASFVTHFSGQTPHIHFDIAGPATTNKASYNGPKGPTGFMIPTIVQWLKQQ


General information:
TITO was launched using:
RESULT:

Template: 3KZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2007 33608 16.75 90.34
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 16.75
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.142

(partial model without unconserved sides chains):
PDB file : Tito_3KZW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KZW-query.scw
PDB file : Tito_Scwrl_3KZW.pdb: