Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAIAGAGAMGSRFGLMLHQSGNEVLLIDGWAEHVQQIKEHGLQANFNGKEVEAKLPIVLQSEVEKEDQVDLIILFTKAMQLEKMLQDIQSLIKKDTEVLCLLNGIGHEDIIEKFVPMENIYIGNTMWTAGLEGPGQVKLFGSGSVELQNLGDGKEAAAKKLADKLSESGLNAHFSDNIHYSIYRKACVNGTMNGLCTILDVNMAELGKTSTAHKMVATIVNEFAKVAAVEKIELDVPEVIAHCESCFDPETIGLHYPSMYQDLIKNHRLTEIDYINGAISRKGKKYGVATPYCDFLTELVHAKEDSLNVK
3HWR Chain:A ((20-316))MKVAIMGAGAVGCYYGGMLARAGHEVILIARPQ-HVQAIEATGLRLETQSFDEQVKVSAS--SDPSAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLEQ-EVAAAVVYVATEMAGPGHVRHHGRGELVIEPTS-----HGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPD-DVALAIRRIAE--TMPRQSSSTAQDLA-RGKRSEIDHLNGLIVRRGDALGIPVPANRVLHALVRLIEDKQQ--


General information:
TITO was launched using:
RESULT:

Template: 3HWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1650 -221448 -134.21 -745.61
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -134.21
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_3HWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HWR-query.scw
PDB file : Tito_Scwrl_3HWR.pdb: