Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSAIKPRSTKKLSQIIVEQLIEKIQSGEFKVGEKIPTELELIETFEVSRSVIREAITELRSLGFVETRHGIGTFVKEQTVEQNFLLSNASLETINDIISLLELRISLESEAVFLASERRKQIHIDKMKAALEDFERHISSDANDGTVKADYDFHIAIAEASENQYFVDFLKYLGEKIIPRARVKSIEQSPENREEYLKAVHHDHVNIYNAIVDQDGLLARQMMRAHLSKSIKKFKQ
3C7J Chain:B ((18-225))---GNEQPPAHLARTVIEEKLRNAIIDGSLPSGTALR-QQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAP--------------LITEDAVDAYALRILLESEALRLSIPLLDADDLAAAASYIEQLEVE-TDFG--QIGRLNRMFHLSLYAKTHNKRLMRLVEEGLNEEERFLR-FN-----LSSM-----SQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAV--


General information:
TITO was launched using:
RESULT:

Template: 3C7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 745 -87009 -116.79 -428.62
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -116.79
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_3C7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C7J-query.scw
PDB file : Tito_Scwrl_3C7J.pdb: