Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------MSQASPVYQGSCLCQGIRYEI--------------KGDIGDIIQCH--CQRCRKSNGTAFATNAPINSADFKITQGEDLIKKFAVNGVYRW--FCSECGSPLISSRDAQP--ELYRLRIGTLDTPLDQKPTMHIFAASKAEWECIHDDLPQYDERP--
1QF6 Chain:A ((63-242))KDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRG-ESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKR


General information:
TITO was launched using:
RESULT:

Template: 1QF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 553 -3651 -6.60 -27.04
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -6.60
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.083

(partial model without unconserved sides chains):
PDB file : Tito_1QF6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QF6-query.scw
PDB file : Tito_Scwrl_1QF6.pdb: