Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTENHLMIERQGKLGVITLDRVTHLNALSLDMIEGIGAQLELWRNDAAVQAILIKSNSPKAFCAGGDIRYLYD-SYKNG-TADYKGYFSAEYKMLNTLREYEKPIIVVLDGYVLGGGFGLAQACHIVVSSEKSRFAMPETAIGFFPDVGATHFLSRLDDIGVYMA----ITGEQISSSDALYLDLIDYHVPSEQLQALQDALVEAPSLSKEGIEHIITRFITRPAESELKQLAEGIRKHFGFQHLDEIEQSLENEQDESLKTWASKMLSILQQRSFIAKQTSLKLQHLGRGLSLQQCMQLERDLQDIWFEHGDFIEGVRALIVDKDKQPRWQERNPELEQILEKLS
3Q0J Chain:C ((3-199))--TYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIII-TGSAKAFAAGADIKEMADLTFADAFTAD----FFATWGKLAAVR---TPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRA--IGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDL--LTEARATATTISQ----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3Q0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1066 -70244 -65.89 -367.77
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.70

3D Compatibility (PKB) : -65.89
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_3Q0J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q0J-query.scw
PDB file : Tito_Scwrl_3Q0J.pdb: