Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLRKMKIPFLLLFFLWEAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRYPVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGKWHL-------GMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQRNTETPFLLVLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPTSNMDIFPTVAKLAGAPLPEDRII-DGRDLMPLLEGKSQRS--DHEFLFHYCNAYLNAVRWHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRE-----RNPLTPASEPRFYEILKVMQE---AADRHTQTLPEVPDQFSWNNFL----WKPWLQLCCPSTGLSCQC-----DREKQDKRLSR--
4UG4 Chain:A ((1-515))------------------GDPVTTGKPNILIIMVDQLNGKLFPDGPADFLHAPNLKALAKRSARFHNNYTSSPLCAPARASFMAGQLPSRTRVYD-----------NAAEYQSSIPTYAHHLRRAGYYTALSGKMHFVGPDQLHGFEERLTTDI--YPADFGWTPDYRKPGERIDWWYHNLGSVTGAGVAEITNQMEYDDEVAFLANQKLYQLSRENDDESRR---------PWCLTVSFTHPHDP--------YVARRKFWDLYEDCEHLTPEVGA-IPLDEQDPHSQRIMLSCDYQNFDVTEENVRRSRRAYFAN-ISYLDEKVGELIDTLTRTRMLDDTLILFCSDHGDML-----------GERGLWF--KMNFFEGSARVPLMIAGPG-IAPGLHLT-PTSNLDVTPTLADLAGISLEEVRPWTDGVSLVPMVNGVERTEPVLMEYAAEASYAPLVAIREGK------WKYVYCAL--------------------------DPEQLFDLEADPLELTNLAENPRGPVDQATLTAFRDMRAAHWDMEAFDAAVRESQARRWVVYEALRNGAYYPWDHQPLQKASERYMRNHMNLDTLEESKRYPRGE


General information:
TITO was launched using:
RESULT:

Template: 4UG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3007 -45210 -15.03 -93.02
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -15.03
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.384

(partial model without unconserved sides chains):
PDB file : Tito_4UG4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UG4-query.scw
PDB file : Tito_Scwrl_4UG4.pdb: