Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMSDNTKYIFLSPHLDDAIFSCGDYISKLTSEGEIVLVITIFSGYPLSQQLQPSAKQFHKLCNLGKY-PIEERKKEDRLACERLQCD-FRHLSYYECLYRKDRNGNFLYRHIYSELKNEDTLKNDIIKELLMHLDDKCVVYCPLS---LGDHVDHVFVNSIGRALEFM-RYKVIYYEDFPYVSDSSMVSYMGKTK-ELKMYQEELDEKHYIDRISSILCYKSQILIIWK-SVEKLLNNIKELYLRN-GAAYSIRFWIKK
4XM1 Chain:F ((28-253))--FEDAKKVICIEPHPDDCAIGMGGTIKKLSDEGVEVIYICMTDGYMGTTDE-----------KLSGHELALIRRREEEESAKLLGVRKIYWLNYRDTELPY-----------------SREVRKDLVK--IIRKEKPDGVFAPDPWLPYESHPDHRRTGFLAIESVAFSQLPNFSNIDIDIGLKPHSVSFIALYYTHKPNYIVDIT-DLMELKLKAIRAHRSQFTDDIWETWEPFLRTVTMFYGEKIGVRYGEGFRVM-


General information:
TITO was launched using:
RESULT:

Template: 4XM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1090 -37241 -34.17 -171.62
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain F : 0.67

3D Compatibility (PKB) : -34.17
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_4XM1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XM1-query.scw
PDB file : Tito_Scwrl_4XM1.pdb: