Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALAKIVFASMTGNTEEIADIVADKLRDLGLDVDVDECTTVDASDF--LEADIAIVATYTYGDGELPDEMMDFYEDLADL--NLNGKIYGVVGSGDTFYDEFCKAVDDFDRVFVSTGAEKGSECVKVDLSAEEEDIERLEQFAEELAAKVG
4OXX Chain:A ((1-148))-MNALILYGTETGNAEACATTISQVLAD-TVDTKVHDLADMTPRAMLDSGADLIVFATATYGEGEFAGGGAAFFETLRETKPDLSGLRFAVFGLGDSYYTTFNQAGATAATILASLGGTQVGDTARHDTSSGDDPAATAAEWAREILTAL-


General information:
TITO was launched using:
RESULT:

Template: 4OXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 822 -44241 -53.82 -307.23
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -53.82
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.534

(partial model without unconserved sides chains):
PDB file : Tito_4OXX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OXX-query.scw
PDB file : Tito_Scwrl_4OXX.pdb: