Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREKMRFPTLVFDIETLTDLKAGAHLYHLDLPEADVEQALTKIRRQESGMDFQRLPLHEIVCISGLWIDESGFRLFS-----FSREHYSEAEILQKFLSIFDKRHP-TLVSWNGSQFDLPVILFRAMYHGLSAPGLFDQGELDSQ-KRFNN-YQNRY-HHRHIDLMDVMAMF-NGRNFQKLDDVACILGLPGKRGESGYHVPEYVRTE-QWLKLTSYCEGDVLNTWFIYLRWLLLKGQMNVDEHNHWISSSIEYLQTMPQQADFLEVWQRTSKHTEFTSHYFNPLNF
1QHT Chain:A ((134-368))-----ELTMLAFAIATLYHEG-------------------------------EEFGTGPILMISYADGSEARVITWKKIDLPYVDVVSTEKEMIKRFLRVVREKDPDVLITYNGDNFDFAYLKKRCEELGIKFTLGRD--GSEPKIQRMGDRFAVEVKGRIHFDLYPVIRRTINLPT-YTLEAVYEAVFGKPKEKVYAEEIAQAWESGEGLERVARYSMEDAKVTYELGREFFP-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1QHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 871 -23111 -26.53 -125.60
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -26.53
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.286

(partial model without unconserved sides chains):
PDB file : Tito_1QHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QHT-query.scw
PDB file : Tito_Scwrl_1QHT.pdb: