Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTDIQLNLIGRTQELFVEDIQHWNNKLIEIVSSSKFLVLGGAGSIGQAVVKEIFKRNPKKLHVVDISENNLTEVVRDIRSSFGYIDGDFQTFALDIGSAEYDAYIENDGDFDYVLNLSALKHVRSEKDPFTLMRMIHVNILNTEKTIQQSIAKGVKKYFCVSTDKAANPVNMMGGSKRIMEMFLMRQSQ-----YIDISTARFANVAFSDGSLLHGFNQRIQKNQPIAAP-NDIRRYFVTPKESGELCLMSCLLGENRDIFFPKLSEHLHLITFADIAVKYLNNLGYEPYLCESEDEARSLIQTLPKQGKWPCLFAGSTTTGEKDFEEFFTDNETLDMQRFNNLGVIKNELNIEEDKLQVFEEKINSMLLSKHWNKEEIVDLFNYMMPNFGHKETGLYLDGKM
4G5H Chain:A ((18-302))--------------------------GSAMGFDDKILLITGGTGSFGNAVMKRFLDSNIKEIRIFSRDEKKQDDIRKKYNN------SKLKFYIGDVRDSQSVETAMR--DVDYVFHAAALKQVPSCEF--FPVEAVKTNIIGTENVLQSAIHQNVKKVICLSTDKAAYPINAMGISKAMMEKVFVAKSRNIRSEQTLICGTRYGNVMASRGSVIPLFIDKIKAGEPLTITDPDMTRFLMSLEDAVELVVHAFKHAETGDIMVQK-APSS---TVGDLATALLELFEAD----------------------NAIEIIGT-RHGEKKAETLLTREEYAQCEDMGDYFRV--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4G5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1445 -43228 -29.92 -154.94
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -29.92
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_4G5H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G5H-query.scw
PDB file : Tito_Scwrl_4G5H.pdb: