Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVKAIWFHAVSVGETNAAQPLIEYYLKL--GQPVLVTNTTKTGQARAKSLFLKEPYLDLFQ-AV---YLP--------VDQKPLLKKFFELYQPKLLALVETELWPNL-IDQAKLQHVPCLLLNARLSEKSAK-GYGKVSGLTAGMLKQLDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFIKQAAQLRQQWYLE-N-RQVVTIASTHA-P-EEQQILEAFAPYLNSDRELVCIVVPRHPERFDEVFEICQN-LNLITHRRSMGQSIHASTQVYLADSM--GELWLWYALSQVCFVGGSLNEPGGGHNILEPMVLNVPTVVGPRYFNFQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVAQAHKVLQRNQGSLQKHIGVINRYLAEKS
3OT5 Chain:B ((25-393))----------------------------------------------MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHREML-DQVLE-I---FDIKPDIDLDIMKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLRTWNKYSPF-PEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILE--NLGDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPA---VREKAMAILGG-------------HERIHLIEPLDAIDFHNFLRKSYLVFTDS-------GGVQEEAPGMGVPVLVLRDTTERPEGIEA-GTLK--LIGTNKENLIKEALDLLDNKESHDKMAQAANPYGD--GFAANRILAAIKSHFE---


General information:
TITO was launched using:
RESULT:

Template: 3OT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1956 37441 19.14 108.52
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : 19.14
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.407

(partial model without unconserved sides chains):
PDB file : Tito_3OT5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OT5-query.scw
PDB file : Tito_Scwrl_3OT5.pdb: