Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MNENPLAVKLPGLELKNPIMPASGCF-GFGKEYGKYYDLNQLGSIMVKATTPNA-RFGNPTPRVAETPS-GMLNAIGLQNPGLDVVMHKLLPELEEYNEL--PIIANVAGACEEDYVEVCSKIGEAPNVKAIELNISCPNVK--HGGIAFGTDSDVAFQLTQAVKKVSSVPVYVKLSPNV-TDIVPIAQAIEAGGADGFTMINTLLG-MRIDLKTRKPIL--ANQTGGLSGPAIKPVAIRLIHQVASI-SSLPIIGMGGVQTVDDVLEMFMAGASAVAIGTANFTD-PYICPKLIKELPVRMSELGIESLERLIKEVREERER
1EP3 Chain:A ((1-311))MTENNRLSVKLPGLDLKNPIIPASG-CFGFGEEYAKYYDLNKLGSIMVKATTLH-PRFGNPTPRVAETA-SGMLNAIGLQNPGLEVIMTEKLPWLNENFP-ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHG--GQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVT-DIVPIAKAVEAAGADGLTMINTLM-GVRFDLKTRQPILAN--ITGGLSGPAIKPVALKLIHQVAQDVD-IPIIGMGGVANAQDVLEMYMAGASAVAVGTANFA-DPFVCPKIIDKLPELMDQYRIESLESLIQEVKEGKK-


General information:
TITO was launched using:
RESULT:

Template: 1EP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1799 -6790 -3.77 -22.86
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -3.77
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_1EP3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EP3-query.scw
PDB file : Tito_Scwrl_1EP3.pdb: