Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNIQEIKEIIPHRYPMLLIDRVEEMVEGERIVAKKNVTINEPFFQGHFPEEPVMPGVLIVEAMAQAGA-VALLSLEQF-----KGKTAYFGGLDKAKFRKKVTPGDTLYLEVEILKVKASAGIGKGIAKVDGKKVAEAELTFMIG
3DOY Chain:B ((14-156))--IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIA


General information:
TITO was launched using:
RESULT:

Template: 3DOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 626 -43903 -70.13 -320.46
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -70.13
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_3DOY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DOY-query.scw
PDB file : Tito_Scwrl_3DOY.pdb: