Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVALVGLLLIIYKKAEKFTIFLLVFSILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLADSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLTVNQSSSYLAAYKSLIAGETKAIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPISSVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIY-GVDSSIHTFSESRWTF-PIYIISNICLLYNT
3PE5 Chain:B ((103-202))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKDPMVLNIMLFGSDERPGETGYGRSDTMMLLSIDNRNKKLKLTSFMRDTYVNVPEWG---DTKLTHAYSYGGPALAIETIERNFGIDIDRYAVVYFDTFPGI


General information:
TITO was launched using:
RESULT:

Template: 3PE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 3 -918 -306.00 -9.37
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.52

3D Compatibility (PKB) : -306.00
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.253

(partial model without unconserved sides chains):
PDB file : Tito_3PE5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PE5-query.scw
PDB file : Tito_Scwrl_3PE5.pdb: