Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQKKSTQKRNQLLAAALDVFSLYGFSGASLDEIAQLADMHKSNIFYYYENKESLYVEVLTTVLQKWLAPLQTL-EA-ELEPAEALSHYLIQKIELSRSQPKASRLFALEIIQGA-PHILPILKGPLKKLFKRKAKVIQTWQEQGKISPDIDPELLILNIWGLTQNYADFATQMEMVTGKTLRNRSMFQRSIEHTVHMMLYGVLPR
2QTQ Chain:D ((16-212))-------GARDLLLQTASNIMREGDVVDISLSELSLRSGLNSALVKYYFGNKAGLLKALLDRDMENIVKSVDALLAKDDMSPEAKLRRHISKCIDTYYDYPYLNRLLMRLVRDSDEAEAKRIADQYLLPLHRAYNRFIGEGVKAGVFRP-INPQLFYFTVTGAADRFFSARLVLKHCFDQDTLTEQLRDSYREHTVDFIMAGILA-


General information:
TITO was launched using:
RESULT:

Template: 2QTQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 684 -37697 -55.11 -194.31
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain D : 0.70

3D Compatibility (PKB) : -55.11
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_2QTQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QTQ-query.scw
PDB file : Tito_Scwrl_2QTQ.pdb: