Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNATLNYQPHWVREDFVDFVLQKINATWAWKRVLAEVTAVQSLHTDMVLIKLKPNRNFNFDQVRAGESILLTLLIDG--VYQQRSYSIIEVTTQGEIALGIKVQ-------GLVSRAAQ-LLHVGECVEISQPQGDFTLHQGQQPAILIASGSGVTAIYSLLQQALKQQLEQIHVIYFNRA---EIFHAELKALAEQYPQLQYHFFNTTEQ-KQHLTE-SLLQKLVPDFEQTATYVCGHHGMMQQANEIYTQKGAQ-SQLHQEYFQPLQVTGTHAAQPVIFRRAQQEFLAETNLLGSAEQAGLRPQHGCRMGVCNKCSCTKVSGVTQNLLTGEIEDQPNRPIKLCVSQALSPVTIDL
4EH1 Chain:B ((2-238))------------------------------DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDNPGLVSHYLHNNVKVGDSVKLYAPAGDFFYVERERPVVLISAGVGATPMQAILHTLAKQNKSGVTYLYACNSAKEHTFAQETAQLIAQQGWMQQ-VWYRDESADDVLQGEMQLAELILPIEDGDFYLCGPIGFMQYVVKQLLALGVDKARIHYEVFGPH-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4EH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1165 -40452 -34.72 -183.04
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : -34.72
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_4EH1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EH1-query.scw
PDB file : Tito_Scwrl_4EH1.pdb: