Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIYSDMFDF------AVDL-R-PNPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLK-RGDNGSMGDLACIAAE--D-LVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTLECDFLVGWTKEVAVSSH--MV----------QQIKQ------------NINQN---FLTSS---KETVVSLVEALEQGKSEKIIEQVEVASKLLEG-LSTDIYTPLLRQLKEASQDLQAV-AKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIELLYQERIGHDDKS
2DEI Chain:A ((1-325))MIKVKSPGRVNLIGEHTDY-TYGYVMPMAINLYTKIEAEKHGE--VILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKES-D---YEVGGIKGRVSGNLP---LGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTL-DY---------------------EYIPFPKDVSILVFYTGVRRELASSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYE--VSCKELDFFVERALKLGAYGARLTGAGFGGSAIALVDKEDA-ETIGEEI-------------------


General information:
TITO was launched using:
RESULT:

Template: 2DEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1445 -32434 -22.45 -115.42
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -22.45
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_2DEI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DEI-query.scw
PDB file : Tito_Scwrl_2DEI.pdb: