Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTS-KGSHLTKTVIIAMGGGAFKPRPLELEGVEDYE--NIH-YHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAP-TTLVHRRDNFRAL-EHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNYGFKSSVGNLKNWGLDLN-RHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHSTSL
3F8P Chain:D ((13-319))-GEKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIV---DDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD-IVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK---RRKLGVPGEQEFAGRGISYCSVCDAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK-----------


General information:
TITO was launched using:
RESULT:

Template: 3F8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1798 -43758 -24.34 -145.86
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -24.34
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3F8P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F8P-query.scw
PDB file : Tito_Scwrl_3F8P.pdb: