Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMNKQPQNSALVVVDVQNGF-TPGGNLAVADADTIIPTINQLAGCFEN----VVLTQDWHPDNHISFAANHPGKQPFETIELD--------YGSQVLWPKHCIQGTHDAEFHPDLNIPTAQ---LIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACKGIDLN-GSLEQAWQTMQQQGVIRIQSTDLLNEC
2H0R Chain:A ((1-216))--------MKTLIVVDMQNDFISPLGSLTVPKGEELINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKEPYSTYTYHSPRPGDDSTQEGILWPVHCVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWNFHKTDMNKYLEKHHTDEVYIVGVALEYCVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVDK-------


General information:
TITO was launched using:
RESULT:

Template: 2H0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1082 32229 29.79 161.95
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : 29.79
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_2H0R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2H0R-query.scw
PDB file : Tito_Scwrl_2H0R.pdb: