Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDIYVEFRGKYKVDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDMVFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSVTPTV-NEEGVPTEAFGLKYAAVEWTYNQQDINGTAKGAVTKKWSLSNNTASYAA
2GUJ Chain:B ((57-139))-------------------------------------------------------GTGTATFYKVTSKFVLLMMDYVKKGSD-PYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLD-----EEEVPFTFEDFDV------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2GUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 236 -8275 -35.06 -108.88
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -35.06
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.282

(partial model without unconserved sides chains):
PDB file : Tito_2GUJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GUJ-query.scw
PDB file : Tito_Scwrl_2GUJ.pdb: