Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKTATALTLACSLLSVMSISQAQAADNIDVSFQTILQQERNWAGLQSKSLKVGDITWSYSEGGSSTKPTLLLIHGLAGSRDNWNRVAHYLTTNYHVIIPDLPGSGETIVSHDFDYSVPNLAEKLRRFVEAANLKGPIHIAGHSLGGSIALLYAGQYPFETKSLFLVDSGGIFRSANTIYLKDLTYLKQLLVSKKGDFNYLLKQTMFNPPFIPREFLQA-QEKL-MINQAPQTQKLVDQLIALNKVYTPDSFAVLTKTIDAPTLILWGKQDKIINVEVANELKRLLKNAQPPVILENVGHMPILEAEQLVIQQYVPFLLKVETNQSSKTTTP
3V48 Chain:B ((4-264))--------------------------------------------------------KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAG-IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRER--LLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALK-RA---DFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD-SQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHR-------


General information:
TITO was launched using:
RESULT:

Template: 3V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1442 -107289 -74.40 -414.24
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.66

3D Compatibility (PKB) : -74.40
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_3V48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V48-query.scw
PDB file : Tito_Scwrl_3V48.pdb: