Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGGMTMSQFDQSITLPSGVQLKNRLMLSPMTTQLSFFNGVITEDEITYYKQRSKGLGAVITGAANVQDIGKGWPGELSIAHDEMIPRLSELAKAIQGEGAKAIIQIFHGGRMTSRATLSGEQPVSASAVAAKR-------PDAETPRAMSEEEIVETIQAFGKATRRAIESGFDGIELHGANTYLIQQFFSPHSNRREDQWGGSLENRYRFIEELLTTVFSAVEQYAKKPFIVGYRFSPEEYETPGIRFED---TIWLLERLRESKLDYLHVSLNMYDRIARSDKYNDKSILEVVHNTIQGKIPLVGVGGIRNREDVEQVLK-Y-AELAAIGQQMIVDPDWAEKLLENREDEFVTKPFEEAYKELYLPSPLYNFLKARYQ
4B5N Chain:A ((7-344))--VNSVENLFDTYKLNDTITLKNRILMAPLTRCMADANLVPTDDMVAYYARRAE-AGLIISEATIIRPDAQGYPNTPGIFTQAQIAGWRKVTDAVHANGGKIFVQLWHTGRVAHPHFFGGGDVLAPSAQKIEGSVPRMRELTYVTPKAVTVEDIQGLVRDYAKAAENVIEAGFDGVEIHGANGYLIDQFLHHDSNRRTDEYGGTPVNMSRFALEVVDAIIARIG-----HDRTGLRISPGAYFNMASDSRDRVVFDYLLPELEKRDLAFVHIGIFDDSIE-FDY--LGGTASSYVRAHY--GKTLVGVGSY-SAETASKAIAEDKFDLIAIGRPFIANPDYVAKVRNSEELV----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4B5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1998 -22651 -11.34 -69.48
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -11.34
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_4B5N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B5N-query.scw
PDB file : Tito_Scwrl_4B5N.pdb: