Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLLLAAAVATLSVNAVQAAPTLYGKLNVSINQVDNKNFDGKSDVTEVNSNSSRIGVKGEEKLTDKLSAVYLAEWAISTDGSGSDT--DLSARNRFIGLKTEGVGTLKVGKYDSYFKTSAGSNQDIF------NDDTRLD-ITNIMYGENRL-DNVVGFELDPKLLAGLTFNIMAQTGESTSDSKKGETGKDSKNDSFDSVSTSLGYEN----------KDLGLAIAAAGDFGIKGKYAAYGLKDVYTDAYRVTGSYDIAKSGFVVGALWQHAEPTDDLTAYGQTYKSDGS-----IDKAGKAYRGLEEEAYAVT--AAYKIPNTKLKVKAEYASAETQVNGQADRKIDLYGL--GLDYQINKQARF------YGIVAQQKRDWLNDDDKQTVVGTGIEYNF
4XFK Chain:A ((9-399))-AEPLKIALVETLSGPQASTGLLYRAAVLYQLGKINEAGGFNGEKIQILEYDNQ----GGPVGAADRVKAAIADGAQIIVQGSSSAVAGQITEDVRKYNLRNKGKEVLYLN-LGAEALELTGSKCHFYHFRFSPNAAIRFKTVAQGMKDKGILGERAYSINQNYSWGVDVENTVVANAKEIGYEVVDKTLHEVNKIQDFSPYVAKIQAANVDTVFTGNWSNDLLLLMKAASGAGLKAKFAT-----SFLDQPGNIGNAGAIAEGHIVSTPFNPEANGEASMAFAEDYKKVTGHYPSYVEPAAVFGLQLFGEALKNVKPGEGKINTTDIALAIENASVKTPMGDYSMRSDDHQAKFPMVVQEVSKKARIKADGTEYGFLPFKTFTGDESIDPVQESCSMKRPG-


General information:
TITO was launched using:
RESULT:

Template: 4XFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2146 80618 37.57 226.46
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 37.57
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_4XFK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XFK-query.scw
PDB file : Tito_Scwrl_4XFK.pdb: