Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKL-CDVVVVSIFVNPTQFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPRLTNISVSQITDDLCGSSRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAEDGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQGKDLQQVLADLKTLLTDNGFVVDYVEARQPNLLAASQFDRDIVLFVAAKLGGTRLIDNLQVAFTPQ
3IUE Chain:B ((31-285))-------------------GRRVM-LVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ----------PRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLR-TTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAA-VALSAALTAAAHAATAGAQAALDAARAVLDAAPGVAVDYLELRDIG-LGPMPLNGSGRLLVAARLGTTRLLDNIAI-----


General information:
TITO was launched using:
RESULT:

Template: 3IUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1220 -59399 -48.69 -243.44
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -48.69
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_3IUE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IUE-query.scw
PDB file : Tito_Scwrl_3IUE.pdb: