Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFYKNILTLSILAAISIPVFAAENENVEKLETIRIKAHPLEQTSKDFAVADTVVDQKHLTE-GAATIGDALNSEVGIYANQFGA-GSSRPVIRGQDGPRVKVLQNSSENVDVSTLSPDHAVTVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQIPENGY--EGQVGLRYNTGSDEKLASAGVTVGLGSQVALRIEGLTRDANNYIAPNYIHEGEKERRVDNTFAQGDSVNVGLSWVYD-RGYTGISYSNRRDQYGLPGHSHEYETCHIHDLSLHCGDHDHEGHSDEEAHDHEHEHGGPWIDLKSERYDFKTELNDPF--AGFQKLRAQASYTDYQHDEIEEGTIATRFQNKGYDGRIELVH--NPIADWEGVIGTQLGQQKLNLTGEE-AFMAPTTTKKWSVFALEHKQWK--DVHFELSARADQQEIDVDDNSKQDFDGSAFSYAGAANWEFAPNYKLSFVASHQERLPLAQELYANGGHFA----TNTYELGNDQLSKEKSNNVELGLHFDN-------DKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKID-AEGNAPRIPAGRLGTKVDADFG-DGFSGSAEYYHVFNQDKIAAYETETEGYNMLNLGVAYSGQYGAKTDYRVYLKANNLLDDTVYQHASFLSNIPQVGRNFTVGVDFSF
3FHH Chain:A ((2-640))-------------------------------ETMTVTATGNARSSFEAPMMVSVIDTSAPENQTATSATDLLRHVPGITLDGTGRTNGQDINMRGYDHRGVLVLVDGIRQGTDTG-HLN-GTFLDPALIKRVEIVRGPSALLYGSGALGGVISYDTVDAKDL-LQEGQSSGFRVFGTGGTGDHSLGLGASAFGR-TENLDGIVAWSSRDRGDLRQSNGE-------T-APNDESINNMLAKGTWQIDSAQSLSGLVRYYNNDAREPKNPQTVEA-SE-------------------S-------SNPMVDRSTIQRDAQLSYKLAPQGNDWLNADAKIYWSEVRINAQ----EYREQITKGARLENRSTLFADSFASHLLTYGGEYYRQEQGSH---TTGFPQAKIDFSSGWLQDEITLRDLPITLLGGTRYDSYRGSSDGY--KDVDADKWSSRAGMTINPTNWLMLFGSYAQAFRAPTMGEMYNDSKHFSIGRFYTNYWVPNPNLRPETNETQEYGFGLRFDDLMLSNDALEFKASYFDTKAKDYISTTVDFA--AATTMSYNVPNAKIWGWDVMTKYTT-DLFSLDVAYNRTRGKDTDTGEYISSINPDTVTSTLNIPIAHSGFSVGWVGTFADRSTHISS---KQPGYGVNDFYVSYQGQQA-LKGMTTTLVLGNAFDKEYWSPQ----GIPQDGRNGKIFVSYQW


General information:
TITO was launched using:
RESULT:

Template: 3FHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3689 154445 41.87 259.57
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 41.87
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.169

(partial model without unconserved sides chains):
PDB file : Tito_3FHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FHH-query.scw
PDB file : Tito_Scwrl_3FHH.pdb: