Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHPIVIIGSGMAGYTLAREFRKLNPEQELVMICADDAVNYAKPTLS-NAFAGKKAPEQIPLGDAAKMSAQLNMRIEPFTWVKEILAERHELVLEKDGIISQQPYSKLILAVGANPIRLAIAGDG---SDDIHVVNSLIDYRSFRENLAQRKDKRVVILGAGLIGCEFANDLLHSEYDVTVIDLAPQPLGRLLPSHIASAFQQNLEEAGVKFTLGTTVEKVSKINNGED-YAVTLANGQTLVADIVLSAIGLQPNISLAQSANIQTSRGVITNSLLETNQADIYAIGDCAEVNGTL------LPYVMPIMQQARALAKTLSGQQTNVHYPAMPV-AVKTPAAPLTVLPAPVDVDVNWETEEF--DDGMLAKAIDNEGTLRGFVLLGATAGKQRLTLTKLVPDLIPAQA
1Q1W Chain:A ((4-380))NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYL-RTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDG---RALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIA--DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDNGIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV-P-RDEAAPWFWSDQYEIGLKMVGLSEGYDRII-VRGSLAQPDFSVFYL-QGDRVLAVDTVNRP--------------------


General information:
TITO was launched using:
RESULT:

Template: 1Q1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2048 -58033 -28.34 -159.87
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -28.34
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_1Q1W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q1W-query.scw
PDB file : Tito_Scwrl_1Q1W.pdb: