Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIEKFSVEKVLSVHRWTPTLFSFTMTRPSHFKFTAGQFARIGLKVGDELIVRAYSVVSSPFDETLEFFSIVVPDGAFTSNLQHLKVGDELYLE-KIPYGYLTLARYQQPLPHDLWLLATGTGLAPFLSMLQDFETWSNYQKINLVYSVRTAAELAYVDRIQEIAETFGE----GHLGFKFIPIITRDPSAPLHERLPVLIENGELEKVA-GLELSPASSHVMLCGNPQMVDDTKEALKRCGLTMN--RRGEGNIAVENYW
2QDX Chain:A ((2-254))----NLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNYEEHLEFFSIKVPDGPLTSRLQHLKEGDELMVSRKP-TGTLVHD--DLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREP-FRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFGLKISPRMGEPGDYLIERAF


General information:
TITO was launched using:
RESULT:

Template: 2QDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1301 -72239 -55.53 -294.85
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -55.53
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_2QDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QDX-query.scw
PDB file : Tito_Scwrl_2QDX.pdb: