Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKKAVLPVAGLGTRFLPASKSIPKEMVTVVDRPAIEYVVREAVEAGIEQIILVTHSSKASIENYFDRNLELETTLEQKKKFDLLAEITQIVPEHVSVVSVRQPQPLGLGHAVLCAKSVVGQDDFAVLLPDVLVKDS---SGQNDLSRMISRYNSSQAAQIMVEAVPDHLVDQYGIVDVKHSP-NEGESIAMQGIVEKPAVGSAPSNLSVVGRYVLPAKIMQLLENTPKGAGNEIQLTDAIAMLQDTDTVEAYRMQGQTFDCGSKIGYLKAVLHYGIEHPKLGNDFKKLIQELKL
2E3D Chain:B ((7-296))KVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEK---RQLLDEVQSICPPHVTIMQVRQG--KGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGHSQIMVE--PVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKT--------QLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIRHNTLGTEFKAWLEE---


General information:
TITO was launched using:
RESULT:

Template: 2E3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1451 -85952 -59.24 -314.84
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.87

3D Compatibility (PKB) : -59.24
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_2E3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2E3D-query.scw
PDB file : Tito_Scwrl_2E3D.pdb: