Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRRSEKSKDTKARLAPKQKISYEKKPDPAITAYAVQSLNWLRQAEFLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSLGNPDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKM--KLDFSIQLFSSLNKLGLEELASVMAGRLHFTLEQQPEFDVDAIPEASDEDAEE
5UCV Chain:B ((29-208))----------------------------------------------------------DTPLEIAFVGRSNAGKSSAINTLTN-------------TQHINFFELQN-GNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAAD---------------------


General information:
TITO was launched using:
RESULT:

Template: 5UCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 782 -88253 -112.85 -534.86
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -112.85
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_5UCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UCV-query.scw
PDB file : Tito_Scwrl_5UCV.pdb: