Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMFSKLKKTWYADDFSYFIRNFGVFTLIFSTMTLIILQVMHSSLYTSVDDKLHGLSENPQAVIQLAINRATEEIKDLENARADASKVEIKPNVSSNTEVILFDKDFTQLLSGNRFLGLDKIKLEKKELGHIYQIQVFNSYGQEEIYRVILMETNISSVSTNIKYAAVLINTSQLEQASQKHEQLIVVVMASFWILSLLASLYLARVSVRPLLESMQKQQSFVENASHELRTPLAVLQNRLETLFRKPEA-TIMDVSESIASSLEEVRNMRFLTTSLLNLARRDDGIKP-ELAEVPT-SFFNTTFTNYEMIASENNRVFRFENR--IHRTIVTDQLLLKQLMTILFDNAVKYTEEDG---EIDFLISATDRNLYLLVSDNGIGISTEDKKKIFDRFYRVDKARTRQKGGFGLGLSLAKQIVDALKGTVTVKDNKPKGTIFEVKIAIQTPSKKKK
4JAV Chain:A ((17-248))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKD-------


General information:
TITO was launched using:
RESULT:

Template: 4JAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 842 30841 36.63 137.68
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 36.63
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_4JAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JAV-query.scw
PDB file : Tito_Scwrl_4JAV.pdb: