Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDGYTRLAAVVANPIKHSISPFIHNRAFEATATN----GAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNTVVNENGNLIGYNTDGKGFFKCLPSFTISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIV---LPETLLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKYQ
3PHJ Chain:B ((1-257))MKLKSF----GVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKS--EFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK---Y--QNALILGAGGSAKALACELKKQGL-QVSVLNRS-----SRG-LDFFQR---LGCD-CFME------PPKSAFDLIINATS-----EL-PLNKEVLKGYFKEGKLAYDLAYG-FLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFE-------


General information:
TITO was launched using:
RESULT:

Template: 3PHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1377 -4343 -3.15 -17.95
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -3.15
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_3PHJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PHJ-query.scw
PDB file : Tito_Scwrl_3PHJ.pdb: