Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEDYE--NIH-YHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAP-TTLVHRRDNFRALE-HSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNYGFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHSTSL
5MIT Chain:A ((24-325))---KYDVVIIGSGPAGMTAAMYTARSEMKTLLLERG-VPGGQMNNTAEI---ENYPGYETIMGPELSMKMAEPLEGLGVENAYG-FVTGIEDHGDYKKIITEDDEFITKSIIIATGAN---HRKLEIPGEEEYGARGVSYCAVCDGAFFRNQEILVIGGGDSAVEEALYLTRFGQSVTIMHRRDKLRAQEIIQQRAFKEEKINFIWDSVPMEIKGDDKKIQSVVYKNVKTGEVTEKAFGGIFIYVGLDPVAEFVSDLGITDEAGWIITDDHMRTNIPGIFAVGDVRQK-D-FRQITTAVGDGAQAAQEAYKFVVE------------


General information:
TITO was launched using:
RESULT:

Template: 5MIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1801 -55533 -30.83 -186.98
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -30.83
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.499

(partial model without unconserved sides chains):
PDB file : Tito_5MIT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MIT-query.scw
PDB file : Tito_Scwrl_5MIT.pdb: